miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|93694564|gb|BW631270.1|BW631270 CTACTGGGGCGAGTGCAGAAAGCACGGTGAGAAGAAGTGGAAATGCGAGAAATGCTCCAAGAAATATGCAGTTCAATCTG
ATTGGAAAGCTCACTCCAAGGTTTGCGGTACCAGAGAGTATAAATGTGACTGCGGCACGGTGTTTTCGAGGAGGGATAGC
TTCATTACTCATAGAGCTTTTTGCGATGCGTTGGCAGAGGAGAGTACAAGATCTCAGACTCAGAAGGCGAATTCGGAGTC
TGAATCGAAGGTTTTAACGGCTGATTCTTCACCGCCGCCAGCTGCTGCCACTGCCGCCGCCGCTAATGCTTCTACTACTC
AGTCAAATAGTGGCATTTCCTCTGCTTTGCAGACACAGAACCTAGAGTTGCCTGAAAATCCCCAACAAATCAGAGAGGAA
CCACAAGCTGTTGTTGCTACTGCTGCTTTAAATGGGAGCTGCAGCAGCAGCAGCTGCACCACCACAATCACTGCCACTAC
CAGCT




Most similar to sp|Q9ZWA6|MGP_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q9ZWA6|MGP_ARATH Zinc finger protein MAGPIE OS=Arabidopsis
           thaliana GN=MGP PE=1 SV=1
          Length = 506

 Score =  110 bits (276), Expect = 3e-24
 Identities = 49/66 (74%), Positives = 52/66 (78%)
 Frame = +2

Query: 14  CRKHGXXXXXXXXXXXXYAVQSDWKAHSKVCGTREYKCDCGTVFSRRDSFITHRAFCDAL 193
           CRKHG            YAVQSDWKAHSK CGTREY+CDCGT+FSRRDSFITHRAFCDAL
Sbjct: 138 CRKHGEKKWKCEKCAKRYAVQSDWKAHSKTCGTREYRCDCGTIFSRRDSFITHRAFCDAL 197

Query: 194 AEESTR 211
           AEE+ R
Sbjct: 198 AEETAR 203